DEG & GWAS Analysis

1 MA plots

1.1 Fold-change cutoff 2

Cold v Ctrl MA plot

Hot v Ctrl MA plot

1.2 No fold-change cutoff

Cold v Ctrl MA plot

Hot v Ctrl MA plot

1.3 No fold-change cutoff (fdr < 0.01)

Cold v Ctrl MA plot

Hot v Ctrl MA plot

2 Shared and unique response

2.1 No labels

2.2 With unique labeled

2.3 With shared labeled

2.4 With shared labeled (padj.hot)

3 Shared and unique response (padj < 0.01)

3.1 No labels

3.2 With unique labeled

3.3 With shared labeled

3.4 With shared labeled (padj.hot)

4 DEG & GWAS

4.1 Expression Plots

Cold vs Ctrl

Hot vs Ctrl

4.2 CTmax & DEG Corr

4.3 CTmin & DEG Corr